Abalone: Difference between revisions
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[[Image:Abalone.png|thumb| Protein simulation on Abalone]] | [[Image:Abalone.png|thumb| Protein simulation on Abalone]] | ||
[http://www.biomolecular-modeling.com/Abalone/index.html Abalone] is a [[molecular dynamics]] and molecular graphics program for simulations of bio-molecules in a [[ | [http://www.biomolecular-modeling.com/Abalone/index.html Abalone] is a [[molecular dynamics]] and molecular graphics program for simulations of bio-molecules in a [[Periodic boundary conditions |periodic rectangular cell]] in explicit water ([[SPC/F]]) or in implicit [[water models]]. Abalone is mainly designed to simulate [[proteins | protein]] folding and DNA-ligand complexes. | ||
==References== | ==References== | ||
==External links== | ==External links== | ||
*[http://www.biomolecular-modeling.com/ Agile Molecule] | *[http://www.biomolecular-modeling.com/ Agile Molecule] | ||
[[Category: Materials modelling and computer simulation codes]] | [[Category: Materials modelling and computer simulation codes]] | ||
Revision as of 15:07, 11 February 2010
Abalone is a molecular dynamics and molecular graphics program for simulations of bio-molecules in a periodic rectangular cell in explicit water (SPC/F) or in implicit water models. Abalone is mainly designed to simulate protein folding and DNA-ligand complexes.