SPC/Fw model of water: Difference between revisions
Jump to navigation
Jump to search
(Undo revision 14455 by 77.66.238.137 (talk)) |
Carl McBride (talk | contribs) m (Reverted edits by 77.66.238.137 (talk) to last revision by Carl McBride) |
||
Line 1: | Line 1: | ||
The '''SPC/Fw''' is a flexible variant of the rigid [[SPC]] model for [[water]] | The '''SPC/Fw''' is a flexible variant of the rigid [[SPC]] model for [[water]] | ||
<ref>[http://dx.doi.org/10.1063/1.2136877 Yujie Wu, Harald L. Tepper and Gregory A. Voth "Flexible simple point-charge water model with improved liquid-state properties", Journal of Chemical Physics '''124''' 024503 (2006)]</ref>. | |||
This model has also been re-parametrised for quantum simulations, adopting the name '''q-SPC/Fw''' | This model has also been re-parametrised for quantum simulations, adopting the name '''q-SPC/Fw''' | ||
<ref name="q-SPC/Fw">[http://dx.doi.org/10.1063/1.2386157 Francesco Paesani, Wei Zhang, David A. Case, Thomas E. Cheatham, III and Gregory A. Voth "An accurate and simple quantum model for liquid water", Journal of Chemical Physics '''125''' 184507 (2006)]</ref>. | |||
The model is given by the intra-molecular component (Eq. 2 of | The model is given by the intra-molecular component (Eq. 2 of <ref name="q-SPC/Fw"> </ref>): | ||
: | :<math>V^{\mathrm {intra}} = \frac{k_b}{2} \left[ \left( r_{\mathrm {OH}_1} - r_{\mathrm {OH}}^{\mathrm {eq}} \right)^2 + \left( r_{\mathrm {OH}_2} - r_{\mathrm {OH}}^{\mathrm {eq}} \right)^2\right] + \frac{k_a}{2} \left( \vartheta_{\angle \mathrm{HOH}} - \vartheta^{\mathrm{eq}}_{\angle \mathrm{HOH}} \right)^2 </math> | ||
and the inter-molecular component (Eq. 3 of | and the inter-molecular component (Eq. 3 of <ref name="q-SPC/Fw"> </ref>): | ||
: | :<math>V^{\mathrm {inter}} = \sum_{ij}^{\mathrm{all~pairs}} \left\{ 4 \epsilon_{ij} \left[ \left(\frac{\sigma_{ij}}{R_{ij}} \right)^{12}- \left( \frac{\sigma_{ij}}{R_{ij}}\right)^6 \right] + \frac{q_i q_j}{R_{ij}}\right\} </math> | ||
The parameters for both of these models are given in the following table (Table I of | The parameters for both of these models are given in the following table (Table I of <ref name="q-SPC/Fw"> </ref>): | ||
[[Image:Thee_site_water_model.png|center|400px]] | [[Image:Thee_site_water_model.png|center|400px]] | ||
Line 18: | Line 18: | ||
{| style="width:75%; height:100px" border="1" | {| style="width:75%; height:100px" border="1" | ||
|- | |- | ||
| Model || | | Model || <math>k_b</math> || <math>r^{\mathrm {eq}}_{\mathrm {OH}}</math> (Å)|| <math>k_a</math> || <math>\vartheta^{\mathrm{eq}}_{\angle \mathrm{HOH}}</math> (deg)|| <math>\sigma_{\mathrm {OO}}</math> (Å)|| <math>\epsilon_{\mathrm {OO}}</math> (kcal mol<sup>-1</sup>)|| q(O) (e) || q(H) (e) | ||
|- | |- | ||
| SPC/Fw || 1059.162 || 1.012 || 75.90 || 113.24 || 3.165492 || 0.1554253 || -0.82 || 0.41 | | SPC/Fw || 1059.162 || 1.012 || 75.90 || 113.24 || 3.165492 || 0.1554253 || -0.82 || 0.41 | ||
Line 24: | Line 24: | ||
| q-SPC/Fw || 1059.162 || 1.000 || 75.90 || 112.0 || 3.165492 || 0.1554252 || -0.84 || 0.42 | | q-SPC/Fw || 1059.162 || 1.000 || 75.90 || 112.0 || 3.165492 || 0.1554252 || -0.84 || 0.42 | ||
|} | |} | ||
where the units of | where the units of <math>k_b</math> and <math>k_a</math> are kcal.mol<sup>-1</sup>Å<sup>-2</sup>. | ||
==Dielectric constant== | ==Dielectric constant== | ||
The dielectric constant has been calculated by Raabe and Sadus | The dielectric constant has been calculated by Raabe and Sadus <ref>[http://dx.doi.org/10.1063/1.3600337 Gabriele Raabe and Richard J. Sadus "Molecular dynamics simulation of the dielectric constant of water: The effect of bond flexibility", Journal of Chemical Physics '''134''' 234501 (2011)]</ref>. | ||
==References== | ==References== | ||
<references/> | |||
{{numeric}} | {{numeric}} | ||
[[category: water]] | [[category: water]] | ||
[[category: models]] | [[category: models]] |
Revision as of 15:30, 29 December 2014
The SPC/Fw is a flexible variant of the rigid SPC model for water [1]. This model has also been re-parametrised for quantum simulations, adopting the name q-SPC/Fw [2]. The model is given by the intra-molecular component (Eq. 2 of [2]):
and the inter-molecular component (Eq. 3 of [2]):
The parameters for both of these models are given in the following table (Table I of [2]):

Model | (Å) | (deg) | (Å) | (kcal mol-1) | q(O) (e) | q(H) (e) | ||
SPC/Fw | 1059.162 | 1.012 | 75.90 | 113.24 | 3.165492 | 0.1554253 | -0.82 | 0.41 |
q-SPC/Fw | 1059.162 | 1.000 | 75.90 | 112.0 | 3.165492 | 0.1554252 | -0.84 | 0.42 |
where the units of and are kcal.mol-1Å-2.
Dielectric constant
The dielectric constant has been calculated by Raabe and Sadus [3].
References
- ↑ Yujie Wu, Harald L. Tepper and Gregory A. Voth "Flexible simple point-charge water model with improved liquid-state properties", Journal of Chemical Physics 124 024503 (2006)
- ↑ 2.0 2.1 2.2 2.3 Francesco Paesani, Wei Zhang, David A. Case, Thomas E. Cheatham, III and Gregory A. Voth "An accurate and simple quantum model for liquid water", Journal of Chemical Physics 125 184507 (2006)
- ↑ Gabriele Raabe and Richard J. Sadus "Molecular dynamics simulation of the dielectric constant of water: The effect of bond flexibility", Journal of Chemical Physics 134 234501 (2011)