Milestoning: Difference between revisions
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{{stub-general}} | {{stub-general}} | ||
'''Milestoning''' | |||
==References== | ==References== | ||
<references/> | |||
;Related reading | |||
*[http://dx.doi.org/10.1063/1.1738640 Anton K. Faradjian and Ron Elber "Computing time scales from reaction coordinates by milestoning", Journal of Chemical Physics '''120''' 10880 (2004)] | *[http://dx.doi.org/10.1063/1.1738640 Anton K. Faradjian and Ron Elber "Computing time scales from reaction coordinates by milestoning", Journal of Chemical Physics '''120''' 10880 (2004)] | ||
*[http://dx.doi.org/10.1063/1.2716389 Anthony M. A. West, Ron Elber and David Shalloway "Extending molecular dynamics time scales with milestoning: Example of complex kinetics in a solvated peptide", Journal of Chemical Physics '''126''' 145104 (2007)] | *[http://dx.doi.org/10.1063/1.2716389 Anthony M. A. West, Ron Elber and David Shalloway "Extending molecular dynamics time scales with milestoning: Example of complex kinetics in a solvated peptide", Journal of Chemical Physics '''126''' 145104 (2007)] | ||
*[http://dx.doi.org/10.1063/1.3590108 Christof Schütte, Frank Noé, Jianfeng Lu, Marco Sarich, and Eric Vanden-Eijnden "Markov state models based on milestoning", Journal of Chemical Physics '''134''' 204105 (2011)] | |||
*[http://dx.doi.org/10.1063/1.3666840 Alexander T. Hawk and Dmitrii E. Makarov "Milestoning with transition memory", Journal of Chemical Physics '''135''' 224109 (2011)] | |||
*[http://dx.doi.org/10.1063/1.4913399 Juan M. Bello-Rivas and Ron Elber "Exact milestoning", Journal of Chemical Physics '''142''' 094102 (2015)] | |||
*[https://doi.org/10.1063/1.5029954 Gianmarc Grazioli and Ioan Andricioaei "Advances in milestoning. I. Enhanced sampling via wind-assisted reweighted milestoning (WARM)", Journal of Chemical Physics 149, 084103 (2018)] | |||
*[https://doi.org/10.1063/1.5037482 Gianmarc Grazioli and Ioan Andricioaei "Advances in milestoning. II. Calculating time-correlation functions from milestoning using stochastic path integrals", Journal of Chemical Physics 149, 084104 (2018)] | |||
[[Category: Computer simulation techniques]] | [[Category: Computer simulation techniques]] | ||
Latest revision as of 11:16, 13 September 2018
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Milestoning
References[edit]
- Related reading
- Anton K. Faradjian and Ron Elber "Computing time scales from reaction coordinates by milestoning", Journal of Chemical Physics 120 10880 (2004)
- Anthony M. A. West, Ron Elber and David Shalloway "Extending molecular dynamics time scales with milestoning: Example of complex kinetics in a solvated peptide", Journal of Chemical Physics 126 145104 (2007)
- Christof Schütte, Frank Noé, Jianfeng Lu, Marco Sarich, and Eric Vanden-Eijnden "Markov state models based on milestoning", Journal of Chemical Physics 134 204105 (2011)
- Alexander T. Hawk and Dmitrii E. Makarov "Milestoning with transition memory", Journal of Chemical Physics 135 224109 (2011)
- Juan M. Bello-Rivas and Ron Elber "Exact milestoning", Journal of Chemical Physics 142 094102 (2015)
- Gianmarc Grazioli and Ioan Andricioaei "Advances in milestoning. I. Enhanced sampling via wind-assisted reweighted milestoning (WARM)", Journal of Chemical Physics 149, 084103 (2018)
- Gianmarc Grazioli and Ioan Andricioaei "Advances in milestoning. II. Calculating time-correlation functions from milestoning using stochastic path integrals", Journal of Chemical Physics 149, 084104 (2018)