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| *[[Initial configuration]]
| | #REDIRECT[[Molecular dynamics]] |
| *[[Verlet leap-frog algorithm]]
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| *[[Velocity Verlet algorithm]]
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| *[[Time step]]
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| *[[Thermostats]]
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| *[[Barostats]]
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| *[[LINCS]]
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| *[[RATTLE]]
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| *[[SETTLE]]
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| *[[SHAKE]]
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| **[[M-SHAKE]]
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| **[[P-SHAKE]]
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| **[[RD-SHAKE]]
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| **[[Q-SHAKE]]
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| *[[WIGGLE]]
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| *[[Rigid bodies]]
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| *[[Event-driven molecular dynamics]]
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| ==General reading==
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| *[http://dx.doi.org/10.2277/0521825687 D. C. Rapaport "The Art of Molecular Dynamics Simulation", Cambridge University Press]
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| ====The 'Alder ''Studies in Molecular Dynamics'' ' series====
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| (not complete)
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| *[http://dx.doi.org/10.1063/1.1730376 B. J. Alder and T. E. Wainwright "Studies in Molecular Dynamics. I. General Method", Journal of Chemical Physics '''31''' pp. 459-466 (1959)]
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| *[http://dx.doi.org/10.1063/1.1731425 B. J. Alder and T. E. Wainwright "Studies in Molecular Dynamics. II. Behavior of a Small Number of Elastic Spheres", Journal of Chemical Physics '''33''' pp. 1439-1451 (1960)]
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| *[http://dx.doi.org/10.1063/1.1725587 B. J. Alder "Studies in Molecular Dynamics. III. A Mixture of Hard Spheres", Journal of Chemical Physics '''40''' pp. 2724-2730 (1964)]
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| *[http://dx.doi.org/10.1063/1.1670653 B. J. Alder, W. G. Hoover, and D. A. Young "Studies in Molecular Dynamics. V. High-Density Equation of State and Entropy for Hard Disks and Spheres", Journal of Chemical Physics '''49''' pp. 3688-3696 (1968)]
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| *[http://dx.doi.org/10.1063/1.1671328 B. J. Alder and C. E. Hecht "Studies in Molecular Dynamics. VII. Hard-Sphere Distribution Functions and an Augmented van der Waals Theory", Journal of Chemical Physics '''50''' pp. 2032-2037 (1969)]
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| *[http://dx.doi.org/10.1063/1.1673845 B. J. Alder, D. M. Gass, and T. E. Wainwright "Studies in Molecular Dynamics. VIII. The Transport Coefficients for a Hard-Sphere Fluid", Journal of Chemical Physics '''53''' pp. 3813-3826 (1970)]
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| *[http://dx.doi.org/10.1063/1.440393 David A. Young and Berni J. Alder "Studies in molecular dynamics. XVIII. The square-well phase diagram", Journal of Chemical Physics '''73''' pp. 2430-2434 (1980)]
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| [[category: molecular dynamics]]
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