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Milestoning - Revision history
2026-04-26T07:30:52Z
Revision history for this page on the wiki
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http://www.sklogwiki.org/SklogWiki/index.php?title=Milestoning&diff=20134&oldid=prev
Carl McBride: /* References */ Added a recent publication
2018-09-13T10:16:36Z
<p><span dir="auto"><span class="autocomment">References: </span> Added a recent publication</span></p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 12:16, 13 September 2018</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.4913399 Juan M. Bello-Rivas and Ron Elber "Exact milestoning", Journal of Chemical Physics '''142''' 094102 (2015)]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.4913399 Juan M. Bello-Rivas and Ron Elber "Exact milestoning", Journal of Chemical Physics '''142''' 094102 (2015)]</div></td></tr>
<tr><td class="diff-marker" data-marker="−"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;"><div> </div></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*[https://doi.org/10.1063/1.5029954 Gianmarc Grazioli and Ioan Andricioaei "Advances in milestoning. I. Enhanced sampling via wind-assisted reweighted milestoning (WARM)", Journal of Chemical Physics 149, 084103 (2018)]</ins></div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*[https://doi.org/10.1063/1.5037482 Gianmarc Grazioli and Ioan Andricioaei "Advances in milestoning. II. Calculating time-correlation functions from milestoning using stochastic path integrals", Journal of Chemical Physics 149, 084104 (2018)]</ins></div></td></tr>
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Carl McBride
http://www.sklogwiki.org/SklogWiki/index.php?title=Milestoning&diff=14593&oldid=prev
Carl McBride: Added a receent publication
2015-03-09T12:07:15Z
<p>Added a receent publication</p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 14:07, 9 March 2015</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.3590108 Christof Schütte, Frank Noé, Jianfeng Lu, Marco Sarich, and Eric Vanden-Eijnden "Markov state models based on milestoning", Journal of Chemical Physics '''134''' 204105 (2011)]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.3590108 Christof Schütte, Frank Noé, Jianfeng Lu, Marco Sarich, and Eric Vanden-Eijnden "Markov state models based on milestoning", Journal of Chemical Physics '''134''' 204105 (2011)]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.3666840 Alexander T. Hawk and Dmitrii E. Makarov "Milestoning with transition memory", Journal of Chemical Physics '''135''' 224109 (2011)]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.3666840 Alexander T. Hawk and Dmitrii E. Makarov "Milestoning with transition memory", Journal of Chemical Physics '''135''' 224109 (2011)]</div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*[http://dx.doi.org/10.1063/1.4913399 Juan M. Bello-Rivas and Ron Elber "Exact milestoning", Journal of Chemical Physics '''142''' 094102 (2015)]</ins></div></td></tr>
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Carl McBride
http://www.sklogwiki.org/SklogWiki/index.php?title=Milestoning&diff=12025&oldid=prev
Carl McBride: Added a recent publication
2011-12-15T10:29:16Z
<p>Added a recent publication</p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 12:29, 15 December 2011</td>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.2716389 Anthony M. A. West, Ron Elber and David Shalloway "Extending molecular dynamics time scales with milestoning: Example of complex kinetics in a solvated peptide", Journal of Chemical Physics '''126''' 145104 (2007)]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.2716389 Anthony M. A. West, Ron Elber and David Shalloway "Extending molecular dynamics time scales with milestoning: Example of complex kinetics in a solvated peptide", Journal of Chemical Physics '''126''' 145104 (2007)]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.3590108 Christof Schütte, Frank Noé, Jianfeng Lu, Marco Sarich, and Eric Vanden-Eijnden "Markov state models based on milestoning", Journal of Chemical Physics '''134''' 204105 (2011)]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.3590108 Christof Schütte, Frank Noé, Jianfeng Lu, Marco Sarich, and Eric Vanden-Eijnden "Markov state models based on milestoning", Journal of Chemical Physics '''134''' 204105 (2011)]</div></td></tr>
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Carl McBride
http://www.sklogwiki.org/SklogWiki/index.php?title=Milestoning&diff=11440&oldid=prev
Carl McBride: Added a recent publication
2011-05-24T16:14:16Z
<p>Added a recent publication</p>
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<td colspan="2" style="background-color: #fff; color: #202122; text-align: center;">Revision as of 18:14, 24 May 2011</td>
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<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">'''Milestoning'''</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>==References==</div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;"><references/></ins></div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">;Related reading</ins></div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.1738640 Anton K. Faradjian and Ron Elber "Computing time scales from reaction coordinates by milestoning", Journal of Chemical Physics '''120''' 10880 (2004)]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.1738640 Anton K. Faradjian and Ron Elber "Computing time scales from reaction coordinates by milestoning", Journal of Chemical Physics '''120''' 10880 (2004)]</div></td></tr>
<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.2716389 Anthony M. A. West, Ron Elber and David Shalloway "Extending molecular dynamics time scales with milestoning: Example of complex kinetics in a solvated peptide", Journal of Chemical Physics '''126''' 145104 (2007)]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>*[http://dx.doi.org/10.1063/1.2716389 Anthony M. A. West, Ron Elber and David Shalloway "Extending molecular dynamics time scales with milestoning: Example of complex kinetics in a solvated peptide", Journal of Chemical Physics '''126''' 145104 (2007)]</div></td></tr>
<tr><td colspan="2" class="diff-side-deleted"></td><td class="diff-marker" data-marker="+"></td><td style="color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;"><div><ins style="font-weight: bold; text-decoration: none;">*[http://dx.doi.org/10.1063/1.3590108 Christof Schütte, Frank Noé, Jianfeng Lu, Marco Sarich, and Eric Vanden-Eijnden "Markov state models based on milestoning", Journal of Chemical Physics '''134''' 204105 (2011)]</ins></div></td></tr>
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<tr><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Category: Computer simulation techniques]]</div></td><td class="diff-marker"></td><td style="background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;"><div>[[Category: Computer simulation techniques]]</div></td></tr>
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Carl McBride
http://www.sklogwiki.org/SklogWiki/index.php?title=Milestoning&diff=8219&oldid=prev
Nice and Tidy: New page: {{stub-general}} ==References== *[http://dx.doi.org/10.1063/1.1738640 Anton K. Faradjian and Ron Elber "Computing time scales from reaction coordinates by milestoning", Journal of Chemical...
2009-05-19T10:47:35Z
<p>New page: {{stub-general}} ==References== *[http://dx.doi.org/10.1063/1.1738640 Anton K. Faradjian and Ron Elber "Computing time scales from reaction coordinates by milestoning", Journal of Chemical...</p>
<p><b>New page</b></p><div>{{stub-general}}<br />
==References==<br />
*[http://dx.doi.org/10.1063/1.1738640 Anton K. Faradjian and Ron Elber "Computing time scales from reaction coordinates by milestoning", Journal of Chemical Physics '''120''' 10880 (2004)]<br />
*[http://dx.doi.org/10.1063/1.2716389 Anthony M. A. West, Ron Elber and David Shalloway "Extending molecular dynamics time scales with milestoning: Example of complex kinetics in a solvated peptide", Journal of Chemical Physics '''126''' 145104 (2007)]<br />
[[Category: Computer simulation techniques]]</div>
Nice and Tidy